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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015799593.1_cds_XP_016465715.1_5808
CDS Infomation

[gene=LOC107788548] [db_xref=GeneID:107788548] [protein=endoglucanase 17-like] [protein_id=XP_016465715.1] [location=join(3532..3789,4370..4576,4682..4882,4974..5066,5182..5343,5431..5542,5622..5785,5864..6196)] [gbkey=CDS]
Sequence

ATGGCTTCTTCCTTTTCTTCTTCTTCTTCCACATTTGCCATAGCCACTTTCCTTTTTCTG
CTATGCTTCACTACCCCTCTGTTTCTTGCCAAACCTCAACACCATGCCCACCATCCTCGC
TTTGCTTCACATAACTATAGAGATGCTCTCGCCAAATCCATTATTTATTTTGAGGGTCAG
AGGTCCGGGAAGCTCCCTTCTAACCAGAGGATCACTTGGCGCAAAGATTCTGGCCTTTCA
GATGGCAAAGCCATGGGTGTTGATTTGGTTGGTGGATATTACGACGCTGGAGACAATGTG
AAGTTCGGTTTCCCAATGGCATTCACAACCACAATGCTGTCATGGAGTGTGCTTGAGTTT
GGTGGATTGATGAAAGGAGAGTTGCAGAATGCTAAAGAAGCCATTGGTTGGGCTACAGAG
TATCTTCTCAAGGCCACTGCTTATCCGGACACCATTTACGTTCAGGTGGGGGATGCAGGA
AAGGACCACTCTTGTTGGGAGAGACCCGAGGATATGGACACCCCAAGAAGTGTTTTCAAG
ATTGACAAAAACACTCCAGGGACTGAGGTTGCTGCTGAAACTGCTGCTGCTCTTGCTGCC
GCTTCTTTAGTCTATAGAAAATGCAACCCTTCTTACTCCAAACTACTAGTCAAAAGGGCC
ATCAGGGTGTTCGAATTTGCGGATAAGTACAGAGGTTCATACAGCAATGGGTTGAGAAAA
GTAGTGTGCCCCTATTATTGCTCAGTTTCTGGATATGAGGATGAGCTGTTGTGGGGTGCT
GCTTGGTTACATAGAGCCACAAAGAACCCATCTTATATCAATTATATCCAAAGAAATGGG
CAAATTCTTGGTGCTGCAGAGACTGATAACACATTCGGGTGGGACAATAAGCATGTTGGA
GCAAGGATTCTTCTTTCCAAGGCATTTCTTGTTCAAAAGCTTCAATCTCTTCATGATTAT
AAGAGTCACGCGGACAACTACATTTGCTCCCTAATTCCAGGCACAGCGTTTTCTCAGGCT
CAATATACACCAGGAGGGTTACTCTTCAAGATGGATGACAGCAATATGCAGTATGTGACC
TCCACCTCTTTCCTGCTAGTCACCTATGCCAAGTACTTAACGTCCGCTCGCATGGTAGTT
AAATGTGGTGGAGTTGTTGTTACACCAAAGAGGCTACGAAACATAGCCAAAAAGCAGGTG
GACTATTTGTTAGGAGACAATCCATTGAAAATGTCATTTATGGTGGGATATGGAGCTAGT
TATCCACAGAGGATTCATCACAGGGGATCTTCATTGCCCTCGGTCTCAAACCATCCATCA
AAAATAGAATGCAGGTCCGGATTCAGTGTGATGAGTTCACAAGCACCAAACCCGAACGTA
CTGGTGGGGGCTGTGGTTGGTGGTCCGGATGAGCACGATCGTTTCCCAGATGAGCGTTCA
GATTATGAGCAATCTGAACCCGCCACTTACATTAACGCTCCGCTAGTTGGAACACTGACT
TACCTGGCTCACTCATTTGGCCAACTCTAG

Peptide Sequence

PEP ID

XP_016465715.1
PEP Infomation

PREDICTED: endoglucanase 17-like [Nicotiana tabacum]
Sequence

MASSFSSSSSTFAIATFLFLLCFTTPLFLAKPQHHAHHPRFASHNYRDALAKSIIYFEGQ
RSGKLPSNQRITWRKDSGLSDGKAMGVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVLEF
GGLMKGELQNAKEAIGWATEYLLKATAYPDTIYVQVGDAGKDHSCWERPEDMDTPRSVFK
IDKNTPGTEVAAETAAALAAASLVYRKCNPSYSKLLVKRAIRVFEFADKYRGSYSNGLRK
VVCPYYCSVSGYEDELLWGAAWLHRATKNPSYINYIQRNGQILGAAETDNTFGWDNKHVG
ARILLSKAFLVQKLQSLHDYKSHADNYICSLIPGTAFSQAQYTPGGLLFKMDDSNMQYVT
STSFLLVTYAKYLTSARMVVKCGGVVVTPKRLRNIAKKQVDYLLGDNPLKMSFMVGYGAS
YPQRIHHRGSSLPSVSNHPSKIECRSGFSVMSSQAPNPNVLVGAVVGGPDEHDRFPDERS
DYEQSEPATYINAPLVGTLTYLAHSFGQL

Transcript Sequence

Gene sequence data has not been registered.